Stage 3 (final stage) has started and is moving pretty good, it typically hangs a minute or two at 99% then it is finished, it is not quite to 99% yet but moving pretty good.
We would have mailed this as an update had we known it would take and extra 15 minutes in time to complete. We are sorry for the extended time it was out for the reboot, but it was a required step due to a number of FTP logging errors that were happening on 2 FTP sites(not the default FTP site, a client anonymous FTP site)